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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014152.1_5680_6536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5680 - 6536

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TAAATCTTTACG

Flanking Amino Acid:

TQEQIEALEKEFERTHYPDV

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

0.6

65.6

41.1

Major PPT

0.9

0.6

85.3

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

52.3

-0

1.8

57.92

43.3

Associated Gene:

Gene:

PAX6

Ensembl Gene ID:

ENSAPLG00000004928

Chromosome:

PEDO01014152.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038059

1458 - 12234

10777

ENSAPLT00000005123

1458 - 12234

10777