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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014152.1_6696_10140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6696 - 10140

Intron Length:

3445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

GGCATTTCAGTT

Flanking Amino Acid:

GTSVPGQPAQDGCPQQEGGG

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

80.2

0.68

0.7

75.8

26.2

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

41.8

-0.5

1.6

49.75

38.2

Associated Gene:

Gene:

PAX6

Ensembl Gene ID:

ENSAPLG00000004928

Chromosome:

PEDO01014152.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038059

1458 - 12234

10777

ENSAPLT00000005123

1458 - 12234

10777