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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014160.1_1125_1193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1125 - 1193

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GGATTCTGACCG

Flanking Amino Acid:

LALCKVVNSHCVFPRELKEV

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

74.6

0.55

0.8

65.8

35.9

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

47.2

-0.3

1.8

50.55

Associated Gene:

Gene:

SYNGAP1

Ensembl Gene ID:

ENSAPLG00000019423

Chromosome:

PEDO01014160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030881

21 - 5756

5736