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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014160.1_2600_3008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2600 - 3008

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGGG

5'SS Class:

major

3'SS Sequence:

ACTTCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTCAC

U12 Branch Point Sequence:

GAGTCACGGACG

Flanking Amino Acid:

LWEVMSQLSKEALLKLGPLP

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.2

58.2

46.8

Major BPS

49.7

-0

1.3

55.1

42.1

Major PPT

77.9

0.63

0.8

69.3

36.2

Minor 5ss

36.6

-1.5

3.4

49.7

46.5

Minor BPS

40.5

-0.8

43.41

41.3

Associated Gene:

Gene:

SYNGAP1

Ensembl Gene ID:

ENSAPLG00000019423

Chromosome:

PEDO01014160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030881

21 - 5756

5736