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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014165.1_1943_2012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1943 - 2012

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

TTGCCCCCAGCC

Flanking Amino Acid:

SPPEAAVACSGSRRLRLAGG

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

70.6

0.46

0.9

64.6

30.8

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

45.6

-0.3

2.1

61.41

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025404

Chromosome:

PEDO01014165.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039196

21 - 2879

2859