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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014173.1_1117_1190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1117 - 1190

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAAAT

U12 Branch Point Sequence:

AACCCCTAAAAT

Flanking Amino Acid:

HLLPLRQRGEGEVHEEQAGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

58.2

0.21

1.2

65.3

36.8

Major PPT

0.83

0.7

80.6

31.4

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

51.3

0.12

1.8

66.59

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024929

Chromosome:

PEDO01014173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029001

21 - 2590

2570