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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014173.1_1638_2241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1638 - 2241

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGCT

U12 Branch Point Sequence:

CTCTGCTTCCCC

Flanking Amino Acid:

MASPAATPARG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

31.3

-1.1

4.2

54.7

43.1

Major PPT

66.7

0.38

0.9

60.8

29.2

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

36.4

-1

3.7

57.24

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024929

Chromosome:

PEDO01014173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029001

21 - 2590

2570