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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014176.1_1291_1560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1291 - 1560

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

CTCTCTGCCACA

Flanking Amino Acid:

ERFLEALRYVGWKKERVVAE

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.2

35.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

73.6

0.53

0.8

67.7

32.4

Minor 5ss

30.6

-2.2

3.5

39.1

40.7

Minor BPS

41.1

-0.7

2.4

54.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003583

Chromosome:

PEDO01014176.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003650

21 - 7935

7915