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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014176.1_234_477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

234 - 477

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTATCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTCTCCTTATCC

Flanking Amino Acid:

GCLVAESIKQAFRVLAEPVA

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

79.4

29.6

Major BPS

78.8

0.72

67.9

40.1

Major PPT

80.5

0.69

0.8

74.5

30.4

Minor 5ss

44.5

-0.6

3.1

64.3

47.2

Minor BPS

75.6

0.78

1.6

82.19

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003583

Chromosome:

PEDO01014176.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003650

21 - 7935

7915