Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014205.1_703_1022_F

Intron Information:

Intron Rank:

151150

Intron Class:

major

Intron Phase:

Intron Coordinates:

703 - 1022

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTTTAGG

5'SS Class:

major

3'SS Sequence:

TTTTTGGGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTGCAG

U12 Branch Point Sequence:

TTGGGTGCAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.2

59.3

44.9

Major BPS

37.4

-0.7

1.7

42.8

49.4

Major PPT

77.7

0.62

72.9

42.2

Minor 5ss

37.6

-1.4

2.4

43.8

43.2

Minor BPS

35.2

-1

2.4

55.1

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031203

Chromosome:

PEDO01014205.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033189

21 - 1824

1804