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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014219.1_1217_1319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1217 - 1319

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CCCTCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAC

U12 Branch Point Sequence:

TGTCCCTTCCCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

68.6

36.4

Major BPS

52.6

0.07

1.1

60.7

37.6

Major PPT

78.4

0.64

0.7

72.3

25.8

Minor 5ss

31.8

-2.1

2.8

37.4

33.2

Minor BPS

44.4

-0.3

3.6

78.23

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019309

Chromosome:

PEDO01014219.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038402

1079 - 4487

3409