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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014219.1_2861_3129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2861 - 3129

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCGGCGCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCCTCCTGGCTC

Flanking Amino Acid:

VESQYGVREMISFEDRRSGR

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

62.2

0.28

38.7

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

37.4

-1

3.4

49.29

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019309

Chromosome:

PEDO01014219.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038402

1079 - 4487

3409