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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014219.1_3216_3674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3216 - 3674

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

AATCTCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCACCAA

U12 Branch Point Sequence:

CCAACCCCAATC

Flanking Amino Acid:

DWDRLSHAGDSTEAPPTPKP

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.9

81.7

27.7

Major BPS

47.5

-0.1

1.3

40.2

Major PPT

77.3

0.61

0.9

70.5

35.2

Minor 5ss

17.2

-3.8

3.5

23.4

37.2

Minor BPS

44.2

-0.4

1.9

48.94

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019309

Chromosome:

PEDO01014219.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038402

1079 - 4487

3409