About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014244.1_694_772_F


Intron Information:

Intron Rank:
129679

Intron Class:
major

Intron Phase:

Intron Coordinates:
694 - 772

Intron Length:
79

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTGGGTAGC

5'SS Class:
major

3'SS Sequence:
TCCTGCACGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTATTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.4
0.25
1.1
56.5
42.7

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
63.3
0.3
1
57.8
37.4

Minor 5ss
32.2
-2
3.1
45.6
42.8

Minor BPS
64.4
0.53
1.7
84.57
36.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01014244.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 1862
1842