Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014265.1_1058_1208_F

Intron Information:

Intron Rank:

135537

Intron Class:

major

Intron Phase:

Intron Coordinates:

1058 - 1208

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCAAGAAAA

5'SS Class:

major

3'SS Sequence:

CCCTCCCGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCTCCTGGGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.4

61.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

66.2

0.36

0.9

60.5

29.4

Minor 5ss

24.7

-2.9

3.8

41.1

Minor BPS

41.9

-0.5

56.17

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022932

Chromosome:

PEDO01014265.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034228

681 - 1557

877