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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014266.1_404_462_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

404 - 462

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCGGCATCT

5'SS Class:

weak_major

3'SS Sequence:

GAAACCATCTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CCTGCTGGAAAC

Flanking Amino Acid:

RSSLYIILSTEVWLRGTWES

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.4

0.01

1.3

48.8

41.6

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

48.5

-0

1.1

46.5

39.9

Minor 5ss

28.5

-2.5

4.2

38.9

46.4

Minor BPS

40.4

-0.7

2.1

47.41

42.5

Associated Gene:

Gene:

HEPACAM

Ensembl Gene ID:

ENSAPLG00000012519

Chromosome:

PEDO01014266.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013029

12 - 2811

2800