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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014340.1_2173_2432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2173 - 2432

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGATGG

5'SS Class:

major

3'SS Sequence:

TCTCCCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

ACCCTCTCACCT

Flanking Amino Acid:

IWIPDIVLYNNADGEFAVTH

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.3

39.2

Major BPS

72.7

0.56

30.1

Major PPT

75.4

0.57

0.7

68.8

Minor 5ss

33.6

-1.9

3.1

38.7

40.8

Minor BPS

46.2

-0.2

1.8

59.24

44.2

Associated Gene:

Gene:

CHRNA2

Ensembl Gene ID:

ENSAPLG00000020368

Chromosome:

PEDO01014340.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035485

21 - 4148

4128