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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014371.1_2594_4234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2594 - 4234

Intron Length:

1641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CACTTGTTAACT

Flanking Amino Acid:

QDELRRELAKVEEEIQTLSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

63.2

0.3

58.5

37.2

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

56.1

0.27

2.1

72.02

45.1

Associated Gene:

Gene:

TPD52

Ensembl Gene ID:

ENSAPLG00000029036

Chromosome:

PEDO01014371.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048121

1498 - 5458

3961