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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014374.1_3506_4576_F

Intron Information:

Intron Rank:

126670

Intron Class:

major

Intron Phase:

Intron Coordinates:

3506 - 4576

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ACTTCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TGAAGCTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

74.9

0.56

0.8

35.2

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

44.7

-0.3

2.1

63.55

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018279

Chromosome:

PEDO01014374.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031350

2798 - 6987

4190

ENSAPLT00000041979

2798 - 8399

5602