Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014383.1_2068_2161_R

Intron Information:

Intron Rank:

149715

Intron Class:

major

Intron Phase:

Intron Coordinates:

2068 - 2161

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGGCCT

5'SS Class:

major

3'SS Sequence:

TCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAC

U12 Branch Point Sequence:

CAAGGATTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.5

Major BPS

64.1

0.35

1.2

67.6

36.5

Major PPT

70.6

0.46

0.7

61.4

29.1

Minor 5ss

32.8

-2

3.6

46.7

Minor BPS

45.6

-0.3

2.1

53.39

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028090

Chromosome:

PEDO01014383.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028483

275 - 2507

2233

ENSAPLT00000027336

275 - 2507

2233