Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014416.1_748_851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

748 - 851

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

AGTTTCTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAA

U12 Branch Point Sequence:

CGGGCAATAAAG

Flanking Amino Acid:

AAVPTKAPGKAPCLRLPQGW

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

70.7

38.9

Major BPS

58.5

0.21

1.1

59.9

32.5

Major PPT

79.4

0.66

0.8

74.2

35.9

Minor 5ss

21.1

-3.3

3.8

31.1

42.6

Minor BPS

39.8

-0.9

39.51

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009816

Chromosome:

PEDO01014416.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010213

21 - 1754

1734