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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014470.1_23173_32633_F

Intron Information:

Intron Rank:

139734

Intron Class:

major

Intron Phase:

Intron Coordinates:

23173 - 32633

Intron Length:

9461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAACAT

U12 Branch Point Sequence:

CCCCTCCCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

68.4

38.7

Major BPS

48.4

-0.1

1.2

54.9

39.1

Major PPT

0.68

0.7

73.6

24.6

Minor 5ss

32.7

-2

45.6

Minor BPS

43.7

-0.4

1.8

48.95

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025139

Chromosome:

PEDO01014470.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037707

22775 - 33724

10950