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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014509.1_3635_3994_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3635 - 3994

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TGTGGTTTAATC

Flanking Amino Acid:

IKAEDGDFPDKFNPNIEYYI

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

77.2

31.1

Major BPS

80.4

0.76

80.3

31.8

Major PPT

80.5

0.69

0.9

76.7

37.4

Minor 5ss

36.2

-1.6

48.5

40.6

Minor BPS

55.2

0.14

1.9

66.24

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030107

Chromosome:

PEDO01014509.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041997

233 - 10958

10726