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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014529.1_2090_2206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2090 - 2206

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GCGGGCTGACCC

Flanking Amino Acid:

VDGTLTPARQKIEPEVDRFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

71.6

0.49

0.8

65.1

30.6

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

39.6

-0.8

2.1

43.13

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004822

Chromosome:

PEDO01014529.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004978

1217 - 6744

5528