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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014532.1_2308_2387_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2308 - 2387

Intron Length:
80

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCCTCTG

5'SS Class:
major

3'SS Sequence:
CTTCCCCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCCCAT

U12 Branch Point Sequence:
CCTGCTCCAACC

Flanking Amino Acid:
GLYATVDFGPGSNLTEAFGA

Intron Amino Acid Position:
240

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.2
0.41
1.2
59.9
46.4

Major BPS
59.7
0.24
1.3
68.6
38.9

Major PPT
75.9
0.58
0.8
70
29.7

Minor 5ss
36.9
-1.5
3.2
49.6
46.6

Minor BPS
45.3
-0.3
1.9
54.53
43.9

Associated Gene:

Gene:
GLB1L

Ensembl Gene ID:

Chromosome:
PEDO01014532.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 4884
4864

21 - 4884
4864

21 - 4884
4864