Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014532.1_2658_2760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2658 - 2760

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGGTGCTGAGCA

Flanking Amino Acid:

DMLRLGANVNMYMFHGGTNF

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

83.6

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

68.9

0.43

62.2

39.8

Minor 5ss

28.2

-2.5

3.8

41.4

38.2

Minor BPS

44.7

-0.4

2.1

54.04

Associated Gene:

Gene:

GLB1L

Ensembl Gene ID:

ENSAPLG00000010268

Chromosome:

PEDO01014532.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029045

21 - 4884

4864

ENSAPLT00000018303

21 - 4884

4864

ENSAPLT00000010699

21 - 4884

4864