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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014535.1_4988_5092_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4988 - 5092

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GGCCGCCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

AGCGCGGTGACG

Flanking Amino Acid:

AGAVPVRNEKGELSMEKVKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

59.1

0.2

0.9

50.2

34.1

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

37.5

-1.1

2.5

40.8

43.9

Associated Gene:

Gene:

MFAP1

Ensembl Gene ID:

ENSAPLG00000006483

Chromosome:

PEDO01014535.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006727

2111 - 5304

3194