Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014541.1_1128_1210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1128 - 1210

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGCCCG

5'SS Class:

major

3'SS Sequence:

GGTGCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

GCCCCCGCACCC

Flanking Amino Acid:

DMELLEMDPENVLLPAGLRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

53.4

45.3

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

65.2

0.34

54.5

41.4

Minor 5ss

31.7

-2.1

3.1

39.4

Minor BPS

38.5

-0.8

2.2

44.44

43.6

Associated Gene:

Gene:

TMOD4

Ensembl Gene ID:

ENSAPLG00000014899

Chromosome:

PEDO01014541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020811

21 - 3884

3864

ENSAPLT00000015543

21 - 3884

3864