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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014541.1_2197_2351_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2197 - 2351

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

ACGCGTGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

TCCCCCTGCACT

Flanking Amino Acid:

GTISNTEGINSVVKPDTYKP

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

59.9

39.3

Major BPS

64.9

0.37

29.8

Major PPT

57.9

0.18

49.9

38.7

Minor 5ss

29.8

-2.3

3.1

38.2

40.5

Minor BPS

50.8

0.11

70.08

46.5

Associated Gene:

Gene:

TMOD4

Ensembl Gene ID:

ENSAPLG00000014899

Chromosome:

PEDO01014541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020811

21 - 3884

3864

ENSAPLT00000015543

21 - 3884

3864