Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014541.1_3628_3739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3628 - 3739

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCCCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGGCCCTGACCT

Flanking Amino Acid:

AIAITRNNELRRKQKKT*

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

60.6

38.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

69.2

0.43

0.8

60.1

35.4

Minor 5ss

30.4

-2.2

3.1

40.5

38.7

Minor BPS

53.2

0.18

1.8

71.43

44.8

Associated Gene:

Gene:

TMOD4

Ensembl Gene ID:

ENSAPLG00000014899

Chromosome:

PEDO01014541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015543

21 - 3884

3864

ENSAPLT00000020811

21 - 3884

3864