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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014541.1_5837_5937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5837 - 5937

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CCCTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCTT

U12 Branch Point Sequence:

CTTCCCTTCCCT

Flanking Amino Acid:

VHRAGRKHLGSLQRCYGSER

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

59.9

39.3

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

81.1

0.7

72.4

32.3

Minor 5ss

29.8

-2.3

3.1

38.2

40.5

Minor BPS

43.9

-0.3

3.6

77.02

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029853

Chromosome:

PEDO01014541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020660

3948 - 6859

2912

ENSAPLT00000042467

3948 - 6859

2912