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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014558.1_2548_2654_F

Intron Information:

Intron Rank:

86802

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2548 - 2654

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CCGGCTCGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

CCGGGCTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

58.6

0.2

49.3

39.3

Minor 5ss

23.1

-3.1

3.2

Minor BPS

44.9

-0.3

2.3

58.45

50.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012267

Chromosome:

PEDO01014558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012836

232 - 10412

10181