Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014558.1_3818_3903_F

Intron Information:

Intron Rank:

86807

Intron Class:

major

Intron Phase:

Intron Coordinates:

3818 - 3903

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCATTG

5'SS Class:

major

3'SS Sequence:

TTCTCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACGCAC

U12 Branch Point Sequence:

TGTCCCTCGACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

63.4

43.8

Major BPS

43.9

-0.3

1.4

Major PPT

0.63

0.7

69.8

Minor 5ss

45.7

-0.5

3.2

64.3

47.2

Minor BPS

59.4

0.15

1.7

65.9

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012267

Chromosome:

PEDO01014558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012836

232 - 10412

10181