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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014558.1_4248_4416_F

Intron Information:

Intron Rank:

86809

Intron Class:

major

Intron Phase:

Intron Coordinates:

4248 - 4416

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

TTTCCCTTCTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

77.8

38.7

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

75.9

0.58

0.8

69.5

31.2

Minor 5ss

34.3

-1.8

3.1

44.5

Minor BPS

-0.1

3.6

85.49

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012267

Chromosome:

PEDO01014558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012836

232 - 10412

10181