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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014558.1_5069_5266_F

Intron Information:

Intron Rank:

86813

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5069 - 5266

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGTGAGT

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

GGGGCTCTGAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.1

53.6

44.8

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

72.6

0.51

0.8

63.8

31.2

Minor 5ss

27.7

-2.6

3.4

39.4

46.3

Minor BPS

38.8

-1

1.9

36.05

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012267

Chromosome:

PEDO01014558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012836

232 - 10412

10181