Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014558.1_8835_8907_F

Intron Information:

Intron Rank:

86822

Intron Class:

major

Intron Phase:

Intron Coordinates:

8835 - 8907

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGAGC

5'SS Class:

major

3'SS Sequence:

CCCCTTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CTTGGCTCACGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.1

56.9

42.1

Major BPS

52.1

0.05

1.3

41.8

Major PPT

69.5

0.44

0.8

63.8

31.2

Minor 5ss

26.2

-2.7

3.1

34.6

41.3

Minor BPS

38.4

-0.9

2.3

49.56

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012267

Chromosome:

PEDO01014558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012836

232 - 10412

10181