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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014594.1_2175_2500_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2175 - 2500

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-CT

5'SS Sequence:

TGA|GTGCGCCCC

5'SS Class:

weak_major

3'SS Sequence:

CCCCCGGCTCCCT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCCCCCTGACCC

Flanking Amino Acid:

VSERSSKYVVSLQLYTIYLI

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.3

0.08

1.1

41.5

39.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

-1.7

4.1

37.3

34.6

Minor 5ss

33.9

-1.8

3.2

39.1

40.3

Minor BPS

46.9

-0.2

1.8

52.11

45.1

Associated Gene:

Gene:

SNX21

Ensembl Gene ID:

ENSAPLG00000018530

Chromosome:

PEDO01014594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024343

1109 - 3120

2012