Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014631.1_2026_2122_R

Intron Information:

Intron Rank:

134938

Intron Class:

major

Intron Phase:

Intron Coordinates:

2026 - 2122

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AGTCTGTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.5

1.14

0.7

83.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.6

0.85

0.8

80.5

Minor 5ss

21.7

-3.3

3.8

31.8

42.6

Minor BPS

44.8

-0.3

2.2

63.81

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019950

Chromosome:

PEDO01014631.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046430

1919 - 4454

2536

ENSAPLT00000032187

1030 - 2654

1625