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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_11028_12008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11028 - 12008

Intron Length:

981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGCGC

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TGTTTTTTTAAG

Flanking Amino Acid:

VARRSGSVSARATPTRVIQH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

55.2

43.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

81.4

0.71

86.9

31.1

Minor 5ss

26.1

-2.7

3.1

33.6

41.9

Minor BPS

50.4

-0.1

1.8

60.53

41.2

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775