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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_15960_17096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15960 - 17096

Intron Length:

1137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTGC

5'SS Class:

major

3'SS Sequence:

TTCTTTTTGTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAACA

Flanking Amino Acid:

SLCSFLTAVKGGSFILSSSR

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

58.3

41.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.9

84.5

30.4

Minor 5ss

35.4

-1.7

3.5

50.3

46.3

Minor BPS

81.8

0.9

85.09

27.2

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775