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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_17268_17894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17268 - 17894

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAAATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTTTTTAAAT

Flanking Amino Acid:

GILSPGNDAVISSVLWDKER

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.5

41.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.5

0.69

0.9

75.7

37.3

Minor 5ss

47.6

-0.2

2.8

61.4

44.4

Minor BPS

73.3

0.81

1.3

84.29

36.6

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775