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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_20833_21922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20833 - 21922

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAGTTTTTATTT

Flanking Amino Acid:

SSSVAGPRSESPAFDVTNRL

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

80.9

31.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.6

0.78

0.8

81.6

Minor 5ss

36.4

-1.5

3.6

56.3

47.9

Minor BPS

54.2

0.21

1.5

66.44

39.1

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775