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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_22015_22809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22015 - 22809

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAATT

5'SS Class:

major

3'SS Sequence:

TCTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTTTTATTT

Flanking Amino Acid:

LLKAAFLQYCRKDIVNAQSM

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

77.9

36.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.4

0.91

0.7

89.1

Minor 5ss

37.4

-1.4

3.5

57.1

47.2

Minor BPS

62.9

0.48

1.5

80.46

35.9

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775