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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_24622_24744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24622 - 24744

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTATTTTTAAAA

Flanking Amino Acid:

HSFFIEFLHQVGVFERLGSF

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

27.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

72.3

0.5

1.1

75.8

Minor 5ss

43.2

-0.7

3.3

64.8

46.5

Minor BPS

71.1

0.66

1.3

76.99

33.4

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775