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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_25719_26085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25719 - 26085

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTGTTTTAATA

Flanking Amino Acid:

EREPEYIPWTASSSLRAAIT

Intron Amino Acid Position:

767

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.65

33.2

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

65.8

0.49

1.3

70.9

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775