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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_29356_30588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29356 - 30588

Intron Length:

1233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGTTTATTAATT

Flanking Amino Acid:

HEINSQDLQKAHRTLQTLAN

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

78.8

38.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.8

0.72

0.9

79.1

38.1

Minor 5ss

48.4

-0.1

3.2

72.7

44.5

Minor BPS

0.74

1.5

85.63

34.2

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775