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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_30725_32521_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

30725 - 32521

Intron Length:

1797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

AAATGACTACAAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTCCTTAAAT

Flanking Amino Acid:

SEEILQEKIEEISEQERFLL

Intron Amino Acid Position:

991

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

47.9

-0.1

1.2

40.4

42.3

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

86.1

1.21

1.1

96.23

28.4

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775