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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_34176_36300_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

34176 - 36300

Intron Length:

2125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ACATGATGTCAAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTCCTTACAT

Flanking Amino Acid:

ALDLLEYIDEEEEVDVNDLK

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

49.9

-0

1.2

45.7

44.5

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

75.8

0.89

1.7

93.4

34.6

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775