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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_36366_38327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36366 - 38327

Intron Length:

1962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGACTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TATTCTTTGACT

Flanking Amino Acid:

KILCMALRRDGWSSSEGRDD

Intron Amino Acid Position:

1079

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

68.1

0.45

58.1

38.5

Major PPT

80.7

0.69

0.9

73.8

35.8

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

83.2

1.13

0.9

92.06

30.2

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775