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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_38417_39448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38417 - 39448

Intron Length:

1032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

AGTTCGGTAACT

Flanking Amino Acid:

VKILQKLLKEGVQLSEYLPE

Intron Amino Acid Position:

1109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

33.3

-1.9

3.3

48.8

Minor BPS

50.6

0.1

2.6

79.07

42.9

Associated Gene:

Gene:

NUP133

Ensembl Gene ID:

ENSAPLG00000003540

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003697

9940 - 39714

29775